Create biological specimen table for MACE summer GOA cruise reports — build_specimen_table_summer

Produce the specimen table for use in standard MACE GOA summer reports. This differs from the specimen table in other MACE reports by including the GOA reporting species- currently pollock, capelin, and POP.

Usage

build_specimen_table_summer_goa(specimen_data, scaling_hauls_list = NULL)

Arguments

specimen_data: a dataframe returned from the 'get_specimen_table_data.R' function, summer GOA cruise reports
scaling_hauls_list: an (optional) numeric vector of hauls that were used to scale backscatter in your analysis. These hauls are returned from the scaling_hauls dataframe in summer GOA cruise reports. If not specified, all hauls in the survey will be reported in the table.#'

Value

A list with two items: item 1 is the Flextable table object, item 2 is the table caption.

Author

Mike Levine

Examples

if (FALSE) { # \dontrun{
# build the table and caption
specimen_table_list <- build_specimen_table_summer_goa(
  specimen_data = specimen_table_data,
  scaling_hauls_list = scaling_hauls$EVENT_ID
)

# unpack tables and captions
specimen_table <- specimen_table_list[[1]]
specimen_caption <- specimen_table_list[[2]]
} # }